Past Conference

2nd Probing Human Disease using Single-Cell Technologies Conference

#SCT24

Date

11 Feb - 14 Feb 2024

Location

Cancun, Mexico

  • Iannis Aifantis

    NYU School of Medicine

  • Samantha Morris

    Washington University in St. Louis

  • Rahul Satija

    New York Genome Center

Early Bird - Expired  •  Talk Submission - Expired  •  Poster Submission - Expired  •  Registration & Payment Deadline - Expired

Synopsis

In recent years, significant advancements have revolutionized the ability to study distinct biological features at the level of individual cells, resulting in profound implications for biology and medicine. These breakthroughs encompass novel microfluidic techniques, molecular advancements in next-generation sequencing, spatial technologies, and the development of computational platforms capable of analyzing large-scale sequencing data. As a result, we can now profile the genome (through DNA sequencing), transcriptome (using RNA sequencing), and epigenome (via ATAC sequencing and DNA methylation sequencing) at the resolution of single cells. This wealth of information has provided unprecedented insights into the biological composition of various cell types, tissues, and even whole organisms.
Within the realm of human health, these sequencing and analytic approaches have been employed to profile both normal and diseased states, leading to remarkable breakthroughs in our understanding of diseases at the single-cell level. Such tools have been applied to the fields of human genetics, immunity, infection, cancer, development, and neurosciences among others, generating tremendous interest and advancements. The primary focus of this conference is to explore the potential impact of these methodological advances in single-cell biology on our understanding of human diseases and their treatment. By bringing together experts in single-cell biology and leaders in human health, we aim to facilitate new interactions, foster collaborations, and generate innovative ideas that can pave the way for future clinical trials and the development of novel therapies. Additionally, we seek to showcase recent technical breakthroughs in sequencing and protocol development, sample preparation techniques, and data analysis methodologies. Given the rapid progress in this field, it is crucial to hear from leaders in single-cell technology development to gain insights into emerging trends and future applications. Ultimately, our objective is to investigate how these technical advancements can be effectively applied to the study of human diseases, providing a glimpse into the future of genomic medicine.

Student Offer

Take advantage of this fantastic opportunity for students! Fully paying ‘single’ or ‘shared’ registrants can bring a student for only $960. Unfortunately, Postdocs are not eligible. Both registration packages include; accommodation for the 11, 12, 13 Feb 24 (on a shared basis for students) and an all-inclusive food and beverage package for the conference period. Once registered, please contact Amy Johnson to obtain a special registration link for your student.

Confirmed Invited Speakers

Elham Azizi (Columbia University)
MACHINE LEARNING CELL DYNAMICS IN THE TUMOR MICROENVIRONMENT
Fernando Camargo (Harvard Stem Cell Institute)
HIGH-RESOLUTION LINEAGE TRACING IN ADULT STEM CELLS
Michelle Chan (Princeton University)
RECONSTRUCTING TRANSIENT PROGENITOR FIELD DYNAMICS IN STEM CELL-DERIVED EMBRYOIDS
Fei Chen (Broad Institute)
A PLATFORM FOR SINGLE CELL SPATIAL GENOMICS 
Hani Goodarzi (University of California, San Francisco)
GENEVA: IN VIVO MOLECULAR PHENOTYPING OF MULTIPLEXED TUMORS IN CANCER RESEARCH AND DRUG DISCOVERY
Lee Grimes (Cincinnati Childrens Hospital)
IDENTIFICATION AND ISOLATION OF HEMATOPOIETIC STEM CELLS AND PROGENITORS WITH DISCRETE DEVELOPMENTAL GENE EXPRESSION PROGRAMS 
Smita Krishnaswamy (Yale University)
UNCOVERING DISEASE DYNAMICS FROM SINGLE CELL DATA WITH OPTIMAL-TRANSPORT BASED FLOWS AND NEURAL ODEs
Dan Landau (New York Genome Center)
NOVEL APPROACHES IN SINGLE-CELL LINEAGE MAPPING OF HUMAN CLONAL MOSAICISM
Caleb Lareau  (Stanford/ MSKCC)
LATENT VIRAL REACTIVATION REVEALED THROUGH SINGLE-CELL TECHNOLOGIES
Ashley Laughney (Weill Cornell Medicine)
TACKLING THE GENOTYPE-TO-PHENOTYPE PROBLEM IN CANCER EVOLUTION 
Mo Lotfollahi (Wellcome Sanger Institute)
GENERATIVE AI TO UNDERSTAND HEALTH AND DISEASE ACROSS CELLS, TISSUES AND PERTURBATIONS
Jose McFaline-Figueroa (Columbia University)
DEFINING THE RESPONSE TO THERAPEUTIC EXPOSURES USING HIGHLY MULTIPLEX SINGLE-CELL GENOMICS
Michael Meers (Washington University)
SINGLE-CELL APPROACHES FOR MULTIFACTORIAL EPIGENOME PROFILING
Jose Ordovas-Montanes (Boston Childrens Hospital)
TISSUE ECOLOGY OF IMMUNITY AND INFLAMMATION ACROSS BARRIERS
Dana Pe'er (Memorial Sloan Kettering Cancer Center)
CAUSES AND CONSEQUENCES OF PLASTICITY DURING TUMOR PROGRESSION.
Sydney Shaffer (University of Pennsylvania)
SPATIAL TRACKING OF STEM CELL DYNAMICS AND CANCER EVOLUTION 
Efrat Shema (Weizmann Institute of Science)
SINGLE-MOLECULE AND SINGLE-CELL TECHNOLOGIES TO DECODE EPIGENETIC HETEROGENEITY IN CANCER
Mario Suva (Mass General Hospital/Harvard Medical School)
DISSECTING HUMAN GLIOMAS BY SINGLE-CELL GENOMICS
Itay Tirosh (Weizmann Institute of Science)
PAN-CANCER ANALYSIS OF INTRA-TUMOR HETEROGENEITY
Xiao Wang (MIT)
TRANSLATING SPATIAL CELL ATLAS TO TISSUE FUNCTION

Target Audience

This conference will appeal to biologists, computational scientists, physicians and technology developers. Some basic knowledge in these fields will be beneficial. Graduate Students and postdoctoral fellows focusing on these areas are particularly welcome.

Educational Need

The field of single cell biology has erupted the last five years with the introduction of next generation sequencing technologies that probe the genome, transcriptome, epigenome and even spatial positioning of individual cells. As the tools and number of applications increases, there is a need for a review of the field and an intense look to the future with a focus on human disease and single cell technology applications.

Leaning Objectives

•    Understanding of how single cell biology impacts the understanding of human disease 
•    To bring together both single cell biologists and human health leaders 
•    To spark new interactions, collaborations and generate ideas
•    To present new technical breakthroughs
 

Confirmed Speakers

Chairs
Iannis Aifantis

Iannis Aifantis

NYU School of Medicine

Samantha Morris

Samantha Morris

Washington University in St. Louis

Rahul Satija

Rahul Satija

New York Genome Center

Invited Speakers
Elham Azizi

Elham Azizi

Columbia University

Fernando Camargo

Fernando Camargo

Harvard Stem Cell Institute

Michelle Chan

Michelle Chan

Princeton University

Fei Chen

Fei Chen

Broad Institute

Hani Goodarzi

Hani Goodarzi

University of California, San Francisco

Lee Grimes

Lee Grimes

Cincinnati Childrens Hospital

Smita Krishnaswamy

Smita Krishnaswamy

Yale

Dan Landau

Dan Landau

New York Genome Center

Caleb Lareau

Caleb Lareau

Stanford/ MSKCC

Ashley Laughney

Ashley Laughney

Weill Cornell Medicine

Mo Lotfollahi

Mo Lotfollahi

Wellcome Sanger Institute

Jose McFaline-Figueroa

Jose McFaline-Figueroa

Columbia University

Michael Meers

Michael Meers

Washington University

Jose Ordovas-Montanes

Jose Ordovas-Montanes

Boston Childrens Hospital

Dana Pe'er

Dana Pe'er

Memorial Sloan Kettering Cancer Center

Sydney Shaffer

Sydney Shaffer

University of Pennsylvania

Efrat Shema

Efrat Shema

Weizmann Institute of Science

Mario Suva

Mario Suva

Mass General Hospital/Harvard Medical School

Itay Tirosh

Itay Tirosh

Weizmann Institute of Science

Xiao Wang

Xiao Wang

MIT

Programme

Please note the following programme is subject to change.

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Venue & Location

Fiesta Americana Condesa Cancun All Inclusive

This stylish hotel features contemporary Mexican architecture, including one of the largest and most impressive thatched-roof "palapas" in the entire country. There are cultural activities, arts and crafts and sports programs to keep you constantly entertained, plus time to relax and enjoy the Mayan culture, soak up the Caribbean sunshine and revel in the international ambiance that settles in after the sun goes down.

Throughout your stay delegates will enjoy a full meal plan, inclusive of beverages. Take your pick from the aromatic Asian delights at Kaumbu, traditional fare at El Mexicano, delicious international cuisine at Kalmia Buffet or perhaps sample the sumptuous Italian dishes at Rosato. There are also several other dining opportunities such as the Cevichería, Pizzeria, Sushi Corner, pool and lounge bar areas. The Gala Night with either a Mayan or Caribbean theme takes place on the third evening of the conference with a mouth-watering feast of local cuisine, an open bar and amazing local entertainment.  We welcome all delegates and their accompanying persons to the Gala Night – a truly fun filled night not to be missed!

Hotel facilities include a lagoon pool, gym, spa, complimentary WIFI throughout the hotel, convenince store, kids club, room service, laundry services (with extra charge) and beach.

General Information

Venue Rating

★ ★ ★ ★ ★

Currency

US Dollar (USD)

Address

Fiesta Americana Condesa Cancún All Inclusive Blvd. Kukulcan km 16.5 Zona Hotelera 77500 Cancun Q.R. Mexico

Nearest Airport

Cancun International Airport

Location

Cancun is a delightful combination of natural beauty, islands, ecological reserves and white sandy beaches. However, besides sun, sand and sea, this destination also offers an infinite variety of underwater activities to choose from: the diving, snorkelling and fishing here are outstanding and you will find an undersea world packed with tropical fish that live on the second largest barrier reef in the world. Sports enthusiasts might choose one of the many eco-tourism activities, such as cycling or hiking through the tropical forest or kayaking through mangroves, or something a little more adventuresome, like zip lining through the treetops.

Apart from the more well-known ancient Mayan archealogical sites such as Tulum, Cobá and Chichén Itzá you may like to visit the Aktun Chen caverns, voted one of the Top 10 underwater walks by National Geographic described as a truly magical experience.

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Conference Manager

Amy Johnson

Need some help? Chat to the Fusion team today

As a family run business, our dedication runs deep. We’re committed to each other and, even more so, to every attendee’s experience, delivering a level of care and passion that’s truly unmatched.

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+44 (0) 1638 555057

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