Past Conference

2nd Synthetic Biology for Natural Products Conference

The Interface of (Meta)Genomics, Synthetic Biology and Natural Product Discovery

Date

02 Jun - 05 Jun 2019

Location

Puerto Vallarta, Mexico

Early Bird - Expired  •  Talk Submission - Expired  •  Poster Submission - Expired  •  Registration & Payment Deadline - Expired

Synopsis

Genome sequencing has revealed an enormous untapped biosynthetic capacity for microbial natural products, only a small fraction of which are represented in fermentation-based screens. Synthetic biology tools are being developed to translate the encoded diversity of microbial biosynthetic pathways into novel compounds and natural products. The Synthetic Biology of Natural Products conference will blend these disciplines with the goal of generating new platforms, tools and technologies to capture, manipulate and engineer natural product genes and pathways. Converting this vast untapped (meta)genomic diversity into novel chemical leads for biomedical and agricultural applications will require breakthroughs in design, scale and biologics that currently limit the field.

Key Sessions

  • (Meta)Genomics-Enabled Natural Product Discovery
  • New Tools for Capturing, Manipulating and Activating Biosynthesis Pathways
  • Heterologous Expression and Synthetic Biology Technologies
  • Trends in the Commercialization of Natural Products

Student Offer

Take advantage of this fantastic opportunity for students! Register an academic at the rate of $1,755 and bring a student for only $700. Unfortunately, Postdocs are not eligible for this offer. Both registration packages include; accommodation for the 02, 03, 04 June 2019 (on a shared basis for students) and a 24hour all-inclusive food and beverage package for the conference period. Once registered, please contact Jack Peters to obtain a special registration link for your student.

Confirmed Invited Speakers

Ikuro Abe (The University of Tokyo)
Tyler Backman (LBNL)
Francisco Barona-Gómez (Cinvestav-IPN)
Richard Baltz (CognoGen Biotechnology Consulting)
Dominic J. Campopiano (University of Edinburgh)
Guy Carter (Biosortia Pharmaceuticals)
Marc Chevrette (University of Wisconsin)
Yousong Ding (University of Florida)
Alessandra Eustaquio (University of Illinois at Chicago)
Sylvie Garneau-Tsodikova (Univeristy of Kentucky)
Rebecca Goss (University of St. Andrews)
Daniel Gray (WarpDrive Bio)
Martin Grininger (University Frankfurt)
Jo Handelsman (University of Wisconsin)
Nancy Keller (University of Wisconsin)
Amy Lane (University of North Florida)
Anita Loeschcke (Heinrich Heine University Düsseldorf)
Nathan Magarvey (McMaster University)
Marnix Medema (Wageningen University and Research)
Elliot Miller (Corteva AgriScience)
Doug Mitchell (University of Illinois at Urbana-Champaign)
Alison Narayan (University of Michigan)
Markus Nett (TU Dortmund)
Anne Osbourn (John Innes Centre)
Philippe Prochasson (LifeMine Therapeutics)
Martin Schmeing (McGill University)
Michael Smanski (University of Minnesota)
Robb Stankey (Varigen)
Yi Tang (UCLA)
Oleg Tsodikov (University of Kentucky)
Tilmann Weber (Technical Univ. Denmark)
Alexander Wentzel (SINTEF)
Gavin Williams (North Carolina State University)
Jaclyn Winter (University of Utah)
Alexandre Zanghelini (Arzeda)
Wenjun Zhang (UC Berkeley)
Nadine Ziemert (University of Tubingen)

Target Audience

Synthetic biology scientists and companies looking to learn the latest engineering and synthetic biology technologies for converting small molecule, natural product pathways into novel compounds. Topics discussed during the conference will span the experimental spectrum from molecular biology, microbiology, drug discovery, chemistry and pharmacology, to antibiosis activities against cancer, viral and microbial pathogens, as well as biocontrol and biostimulants.

Educational Need

A new generation of tools and technologies is needed to convert the vast biodiversity found in natural product pathways into bioactive compounds and treatments. The Synthetic Biology of Natural Products conference will bring together a broad spectrum of research scientists and corporate managers interested in learning about the latest developments in this new field.

Confirmed Speakers

Invited Speakers
Douglas Mitchell

Douglas Mitchell

Alumni Research Scholar Professor, University of Illinois at Urbana-Champaign

Nadine Ziemert

Nadine Ziemert

Professor, University Tuebingen

Guy Carter

Guy Carter

Chief Scientific Officer, Biosortia Pharmaceuticals

Robert Stankey

Robert Stankey

Principal Scientist, Terra Bioforge

Markus Nett

Markus Nett

Professor, TU Dortmund University

Gavin Williams

Gavin Williams

Associate Professor, NC State University

Marnix Medema

Marnix Medema

Assistant Professor, Wageningen University

Tyler Backman

Tyler Backman

Postdoctoral Fellow, Lawrence Berkeley National Laboratory

Alessandra Eustaquio

Alessandra Eustaquio

Assistant Professor, University of Illinois at Chicago

Tilmann Weber

Tilmann Weber

Professor / Co-Principal Investigator, Technical University of Denmark

Wenjun Zhang

Wenjun Zhang

Associate Professor, UC Berkeley

Ikuro Abe

Ikuro Abe

Professor, The University of Tokyo

Jaclyn Winter

Jaclyn Winter

Assistant Professor, University of Utah

Alexander Wentzel

Alexander Wentzel

Senior Researcher, SINTEF Industry

Anita Loeschcke

Anita Loeschcke

Junior Group Leader, Heinrich Heine University Düsseldorf

Martin Grininger

Martin Grininger

Professor of Biomolecular Chemistry, University Frankfurt

Yousong Ding

Yousong Ding

Associate Professor, University of Florida

Martin Schmeing

Martin Schmeing

Ass Prof, McGill University

Philippe Prochasson

Philippe Prochasson

Director, LifeMine Therapeutics

Francisco Barona-Gomez

Francisco Barona-Gomez

Professor, Langebio - Cinvestav

Mike Smanski

Mike Smanski

Assistant Professor, University of Minnesota

Marc Chevrette

Marc Chevrette

Assistant Professor, University of Florida

Richard Baltz

Richard Baltz

Chief Scientific Officer, CognoGen Biotechnology Consulting

Elliot Miller

Elliot Miller

Lead Molecular Microbiologist, Corteva Agriscience

Daniel Gray

Daniel Gray

Senior Program Director, Ginkgo Bioworks

Amy Lane

Amy Lane

Associate Professor, University of North Florida

Alexandre Zanghellini

Alexandre Zanghellini

Co-Founder and CEO, VP Research, Arzeda Corp

Yi Tang

Yi Tang

Professor, University of California Los Angeles

Jo Handelsman

Jo Handelsman

Director, Wisconsin Institute for Discovery

Alison Narayan

Alison Narayan

Assistant Professor, University of Michigan

Rebecca Goss

Rebecca Goss

Professor, University of St Andrews

Sylvie Garneau-Tsodikova

Sylvie Garneau-Tsodikova

Professor, University of Kentucky

Oleg Tsodikov

Oleg Tsodikov

Associate Professor, University of Kentucky

Dominic Campopiano

Dominic Campopiano

Professor, University of Edinburgh

Nathan Magarvey

Nathan Magarvey

Professor, McMaster University

Programme

SUNDAY 2ND JUNE 2019

13:30 – 14:30

Student Networking Lunch

14:00 – 15:00

Registration & Welcome Reception

(Meta) Genomics-Enabled Natural Product Discovery 
Nigel Mouncey

15:00 – 15:10

Opening Comments

15:10 – 15:45

Jo Handelsman 
University of Wisconsin

CHEMICAL DIVERSITY FROM THE SOIL MICROBIOME

15:45 – 16:10

Nathan Magarvey 
McMaster University

FUNCTIONS AND DISCOVERY OF PEPTIDE ANTIBIOTICS VIA ARTIFICIAL INTELLIGENCE

16:10 – 16:35

Nadine Ziemert 
University of Tubingen

COMPUTATIONAL GENOME MINING TOOLS FOR THE DISCOVERY OF BACTERIAL NATURAL PRODUCTS

16:35 – 17:00

Doug Mitchell 
University of Illinois at Urbana-Champaign

HIGH-THROUGHPUT RiPP DISCOVERY

17:00 – 17:15

Nigel Mouncey 
DOE Joint Genome Institute

EXPANDING THE NATURAL PRODUCTS GALAXY THROUGH METAGENOMICS

17:15 – 18:00

Refreshments

18:00 – 18:25

Wenjun Zhang 
UC Berkeley

GENOMICS-ENABLED NATURAL PRODUCT DISCOVERY

18:25 – 18:50

Marc Chevrette 
University of Wisconsin

MINING MICROBIOMES FOR ANTIMICROBIALS

18:50 – 19:05

Alison Murray 
Desert Research Institute

MICROBIOME EXPLORATIONS OF A UNIQUE MACROLIDE-PRODUCING ANTARCTIC ASCIDIAN

19:05 – 19:30

Alexander Wentzel 
SINTEF

EXPANDING THE (META)GENOMICS TOOLBOX FOR THE DISCOVERY AND PRODUCTION OF NOVEL NATURAL PRODUCTS FROM MICROBIAL RESOURCES

19:30 – 19:55

Marnix Medema 
Wageningen University and Research

COMPUTATIONAL OMICS APPROACHES TO NATURAL PRODUCT DISCOVERY

19:55

Group Dinner

MONDAY 3RD JUNE 2019

07:00 – 08:30

Buffet Breakfast at Chulavista

Advances in Natural Product Engineering I 
Michael Thomas

08:30 – 08:55

Dominic J. Campopiano 
University of Edinburgh

OVERCOMING EVOLUTION TO ENGINEER DESIGNER BIOCATALYSTS

08:55 – 09:20

Martin Grininger 
Goethe University Frankfurt

ENGINEERING FATTY ACID SYNTHASES (FASs) FOR CUSTOM COMPOUND SYNTHESIS

09:20 – 09:35

Stephan Thies 
Heinrich-Heine-University Duesseldorf

RECOMBINANT BACTERIAL CELL FACTORIES FOR DISCOVERY, TAILORING, AND PRODUCTION OF BIOSURFACTANTS

09:35 – 10:00

Alison Narayan 
University of Michigan

BIOCATALYSIS AND COMPLEX MOLECULE SYNTHESIS

10:00 – 10:45

Group Photo, Refreshments & Poster Viewing

10:45 – 11:10

Ikuro Abe 
The University of Tokyo

UNUSUAL ENZYME REACTIONS IN NATURAL PRODUCT BIOSYNTHESIS

11:10 – 11:25

Anna Lisa Camus 
ETH Zurich

ACCESSING BACKBONE-MODIFIED NONRIBOSOMAL PEPTIDES THROUGH ENZYME ENGINEERING

11:25 – 11:50

Alessandra EustaquioUniversity of Illinois at Chicago

HARNESSING BACTERIAL GENOMES AND SYNTHETIC BIOLOGY FOR DRUG DISCOVERY

11:50 – 12:25

Meet the Poster Presenters

12:25 – 17:00

Lunch at Leisure

Advances in Natural Product Engineering II 
Michael Thomas

17:00 – 17:25

Yi Tang 
UCLA

NATURAL PRODUCT GENOME MINING IN FUNGI

17:25 – 17:50

Nancy Keller 
University of Wisconsin

SECRETS TO UNLOCKING THE FUNGAL METABOLOME

17:50 – 18:15

Gavin Williams 
North Carolina State University

NEW-TO-NATURE ISOPRENOIDS AND POLYKETIDES VIA PRECURSOR-DIRECTED BIOSYNTHESIS

18:15 – 18:30

Hajo Kries 
Leibniz-HKI

BIOSYNTHETIC DESIGN OF NONRIBOSOMAL PEPTIDE BIOSYNTHESIS

18:30 – 20:15

Poster Session & Refreshments

20:15

Dinner at Leisure

TUESDAY 4TH JUNE 2019

07:00 – 08:30

Buffet Breakfast at Chulavista

IV Trends in the Commercialization of Natural Products 
Charles Moore

08:30 – 09:05

Richard Baltz 
CognoGen Biotechnology Consulting

SYNTHETIC BIOLOGY AND NATURAL PRODUCT DRUG DISCOVERY

09:05 – 09:30

Elliot Miller 
Corteva AgriScience

OVERCOMING STRAIN ENGINEERING CHALLENGES TO INCREASE PRODUCTION OF UK-2A, THE PRECURSOR OF THE FUNGICIDE INATREQ™ ACTIVE

09:30 – 09:55

Daniel Gray 
Ginkgo Bioworks

HARNESSING GENOMIC INFORMATION AND SYNTHETIC BIOLOGY TO ENGINEER THE BIOSYNTHESIS OF NOVEL NATURAL PRODUCTS

09:55 – 10:20

Tyler Backman 
Lawrence Berkeley National Laboratory

COMPUTER AIDED POLYKETIDE SYNTHASE (PKS) DESIGN

10:20 – 11:05

Refreshments & Poster Viewing

11:05 – 11:30

Philippe Prochasson 
LifeMine Therapeutics

FROM COMPOST TO CAPSULES: MINING FUNGAL GENOMES FOR TRANSFORMATIVE HUMAN THERAPEUTIC

11:30 – 11:55

Alexandre Zanghelini 
Arzeda

NATURAL PRODUCT DISCOVERY OR COMPUTATIONAL DESIGN? IN-VITRO SAMPLING OF NEW MOLECULAR SCAFFOLDS WITH COMPUTATIONAL ENZYME AND PATHWAY DESIGN

11:55 – 12:20

Guy Carter 
Biosortia Pharmaceuticals

CYANOBUFALINS: NOVEL CARDIOACTIVE TOXINS FROM CYANOBACTERIAL BLOOMS

12:20 – 12:35

Patrick Gerlinger 
Max Planck Institute for Terrestrial Microbiology

IDENTIFYING BOTTLENECKS IN AN ENGINEERED POLYKETIDE SYNTHASE

12:35 – 16:30

Lunch at Leisure 
 

New Tools for Capturing, Manipulating and Activating Biosynthesis Pathways 
David Mead

16:30 – 16:55

Markus Nett 
TU Dortmund

GENETIC TOOLS FOR DIRECTING NATURAL PRODUCT BIOSYNTHESIS IN MYXOBACTERIA

16:55 – 17:20

Yousong Ding 
University of Florida

IN VIVO AND IN VITRO SYNTHETIC BIOLOGY APPROACHES TO THE PRODUCTION OF HERBICIDAL CYCLIC DIPEPTIDES

17:20 – 17:45

Anita Loeschcke 
Heinrich Heine University Düsseldorf

THE P. PUTIDA rRNA OPERONS: EXCEPTIONALLY SUITED CHROMOSOMAL SITES FOR NATURAL PRODUCT GENE CLUSTER EXPRESSION

17:45 – 18:00

Robert Stankey 
Varigen Biosciences

NEW TOOLS FOR TARGETED CLONING AND OVER EXPRESSION OF BIOSYNTHETIC GENE CLUSTERS

18:00 – 18:45

Refreshments & Poster Viewing

18:45 – 19:10

Michael Smanski 
University of Minnesota

DESIGNED BIOSYNTHESIS OF A NATURAL PRODUCT OF UNKNOWN ORIGIN

19:10 – 19:35

Tilmann Weber 
Technical Univ. Denmark

INTEGRATION OF INFORMATICS, METABOLIC ENGINEERING AND SYNTHETIC BIOLOGY FOR THE DISCOVERY AND ANALYSIS OF NATURAL PRODUCTS

19:35 – 20:00

Francisco Barona-Gómez 
Cinvestav-IPN

EVOLUTIONARY AND ECOLOGICAL (META) GENOME-MINING OF NATURAL PRODUCTS

20:00

Gala Dinner & Poster Awards

WEDNESDAY 5TH JUNE 2019

07:00 – 09:00

Buffet Breakfast at Chulavista

Natural Biosynthetic Enzyme Structure and Activity 
Michael Burkart

09:00 – 09:25

Martin Schmeing 
McGill University

STRUCTURES AND FUNCTIONS OF NONRIBOSOMAL PEPTIDE SYNTHETASES

09:25 – 09:50

Rebecca Goss 
University of St. Andrews

GENOCHEMETIC TOOLS FOR BLENDING SYNTHETIC CHEMISTRY WITH THE SYNTHETIC BIOLOGY OF NATURAL PRODUCTS

09:50 – 10:15

Amy Lane 
University of North Florida

ASSEMBLY AND MANIPULATION OF BIOSYNTHETIC PUZZLE PIECES YIELDING DIKETOPIPERAZINE NATURAL PRODUCTS

10:15 – 10:45

Refreshments

10:45 – 11:10

Sylvie Garneau-Tsodikova 
University of Kentucky

ENGINEERING MULTIFUNCTIONAL ENZYMES FOR NONRIBOSOMAL PEPTIDE SYNTHESIS

11:10 – 11:35

Jaclyn Winter 
University of Utah

DEVELOPING HETEROLOGOUS EXPRESSION PLATFORMS FOR ELUCIDATING FUNGAL TERPENE BIOSYNTHESIS

11:35 – 12:00

Oleg Tsodikov 
University of Kentucky

VERSATILITY OF ENZYMATIC HALOGENATION

12:00 – 12:10

Closing Comments

Supported by

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Venue & Location

Fiesta Americana Puerto Vallarta All Inclusive

The Fiesta Americana Puerto Vallarta All Inclusive is in the beautiful Bahía de Banderas on the Pacific Coast of Mexico. With a mix of contemporary Mexican architecture and the more traditional Mexican styles of Jalisco, the buildings blend perfectly with the surrounding landscape of the Western Sierra Madre Mountains.

Located just 13km from Licenciado Gustavo Díaz Ordaz International Airport and within easy reach of the town of Puerto Vallarta with its array of boutique shops and set alongside one of the most beautiful beaches in the area, this provides the perfect setting for a conference.

Throughout your stay delegates will enjoy a full meal plan, inclusive of beverages. Take your pick from the wonderful selection of restaurants such as Chulavista, a contemporary  buffet restaurant overlooking the beach offering Mexican and International cuisine, Rosato, offering mediterranean cuisine with an Italian twist, El Mexicano, serving traditional Mexican fare, Tiatang, adults-only restaurant serving Asian cuisine nightly for dinner and L'Isola, a sophisticated restaurant serving lobster and fine meat cuts in a poolside setting - there is a surchage for dining at this venue. There are also several other dining opportunities such as the Cevichería, Fajita House and Grill as well as the Terrace and Pool Bars. The Café / Deli Express is also open daily for coffee, teas, cakes and pastries.

The themed Gala Night takes place on the third evening of the conference with a mouth-watering feast of local cuisine, an open bar and amazing local entertainment.  We welcome all delegates and their accompanying persons to the Gala Night – a truly fun filled night not to be missed!

Hotel facilities include;

  • Complimentary Wi-Fi in guest rooms and throughout hotel and conference areas
  • Lagoon Pool
  • Spa
  • Fitness Center
  • 8 Restaurants
  • Kids Club
  • Private Beach

General Information

Venue Rating

★ ★ ★ ★

Currency

US Dollar (USD)

Address

Blvd Francisco Medina Ascencio Km 2.5, Puerto Vallarta 48300, Mexico

Nearest Airport

Licenciado Gustavo Di­az Ordaz International Airport (PVR)

Location

Originally a bustling mining town known as the ‘Las Peñas’ in the 19th century, Puerto Vallarta is framed by the stunning mountains of the Sierra Madre Occidental of Jalisco and the immense Mexican Pacific. This fascinating destination with red roofs, golden sunsets, cobbled streets and beautiful beaches possesses everything that makes for an incredible place to visit.

Puerto Vallarta’s art offering is amazing, from crafts found in the flea market to the fleeting creations made by artists with the sand on the beach. Its art galleries, boardwalk, calm Banderas Bay waters - loved by scuba diving enthusiasts and bustling nightlife bare some of the contrasts that Vallarta holds.

There are many activities you can enjoy during your fee time such as visiting the El Salado estuary, going on horseback up the Quimixto waterfall or taking a tour of Banderas Bay. You may also like to explore the Jardín Botánico de Vallarta where you will find orchids, bromeliads, agaves, wild palms and fern grottos along the paths of this gorgeous nature park.

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Conference Manager

Jack Peters

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